424 research outputs found
First principles calculation of vibrational Raman spectra in large systems: signature of small rings in crystalline SiO2
We present an approach for the efficient calculation of vibrational Raman
intensities in periodic systems within density functional theory. The Raman
intensities are computed from the second order derivative of the electronic
density matrix with respect to a uniform electric field. In contrast to
previous approaches, the computational effort required by our method for the
evaluation of the intensities is negligible compared to that required for the
calculation of vibrational frequencies. As a first application, we study the
signature of 3- and 4-membered rings in the the Raman spectra of several
polymorphs of SiO2, including a zeolite having 102 atoms per unit cell.Comment: 4 pages, 2 figures, revtex4 Minor corrections; accepted in Phys. Rev.
Let
Neuronal inhibition of the autophagy nucleation complex extends life span in post-reproductive C. elegans
Autophagy is a ubiquitous catabolic process that causes cellular bulk degradation of cytoplasmic components and is generally associated with positive effects on health and longevity. Inactivation of autophagy has been linked with detrimental effects on cells and organisms. The antagonistic pleiotropy theory postulates that some fitness-promoting genes during youth are harmful during aging. On this basis, we examined genes mediating post-reproductive longevity using an RNAi screen. From this screen, we identified 30 novel regulators of post-reproductive longevity, including pha-4 Through downstream analysis of pha-4, we identified that the inactivation of genes governing the early stages of autophagy up until the stage of vesicle nucleation, such as bec-1, strongly extend both life span and health span. Furthermore, our data demonstrate that the improvements in health and longevity are mediated through the neurons, resulting in reduced neurodegeneration and sarcopenia. We propose that autophagy switches from advantageous to harmful in the context of an age-associated dysfunction
Advanced development for space robotics with emphasis on fault tolerance
This paper describes the ongoing work in fault tolerance at the University of Texas at Austin. The paper describes the technical goals the group is striving to achieve and includes a brief description of the individual projects focusing on fault tolerance. The ultimate goal is to develop and test technology applicable to all future missions of NASA (lunar base, Mars exploration, planetary surveillance, space station, etc.)
Large well-relaxed models of vitreous silica, coordination numbers and entropy
A Monte Carlo method is presented for the simulation of vitreous silica.
Well-relaxed networks of vitreous silica are generated containing up to 300,000
atoms. The resulting networks, quenched under the BKS potential, display
smaller bond-angle variations and lower defect concentrations, as compared to
networks generated with molecular dynamics. The total correlation functions
T(r) of our networks are in excellent agreement with neutron scattering data,
provided that thermal effects and the maximum inverse wavelength used in the
experiment are included in the comparison. A procedure commonly used in
experiments to obtain coordination numbers from scattering data is to fit peaks
in rT(r) with a gaussian. We show that this procedure can easily produce
incorrect results. Finally, we estimate the configurational entropy of vitreous
silica.Comment: 7 pages, 4 figures (two column version to save paper
Sums of magnetic eigenvalues are maximal on rotationally symmetric domains
The sum of the first n energy levels of the planar Laplacian with constant
magnetic field of given total flux is shown to be maximal among triangles for
the equilateral triangle, under normalization of the ratio (moment of
inertia)/(area)^3 on the domain. The result holds for both Dirichlet and
Neumann boundary conditions, with an analogue for Robin (or de Gennes) boundary
conditions too. The square similarly maximizes the eigenvalue sum among
parallelograms, and the disk maximizes among ellipses. More generally, a domain
with rotational symmetry will maximize the magnetic eigenvalue sum among all
linear images of that domain. These results are new even for the ground state
energy (n=1).Comment: 19 pages, 1 figur
Phase diagram for diblock copolymer melts under cylindrical confinement
We extensively study the phase diagram of a diblock copolymer melt confined
in a cylindrical nanopore using real-space self-consistent mean-field theory.
We discover a rich variety of new two-dimensional equilibrium structures that
have no analog in the unconfined system. These include non-hexagonally
coordinated cylinder phases and structures intermediate between lamellae and
cylinders. We map the stability regions and phase boundaries for all the
structures we find. As the pore radius is decreased, the pore accommodates
fewer cylindrical domains and structural transitions occur as cylinders are
eliminated. Our results are consistent with experiments, but we also predict
phases yet to be observed.Comment: 12 pages, 3 figures. submitted to Physical Review Letter
A symmetric polymer blend confined into a film with antisymmetric surfaces: interplay between wetting behavior and phase diagram
We study the phase behavior of a symmetric binary polymer blend which is
confined into a thin film. The film surfaces interact with the monomers via
short range potentials. We calculate the phase behavior within the
self-consistent field theory of Gaussian chains. Over a wide range of
parameters we find strong first order wetting transitions for the semi-infinite
system, and the interplay between the wetting/prewetting behavior and the phase
diagram in confined geometry is investigated. Antisymmetric boundaries, where
one surface attracts the A component with the same strength than the opposite
surface attracts the B component, are applied. The phase transition does not
occur close to the bulk critical temperature but in the vicinity of the wetting
transition. For very thin films or weak surface fields one finds a single
critical point at . For thicker films or stronger surface fields
the phase diagram exhibits two critical points and two concomitant coexistence
regions. Only below a triple point there is a single two phase coexistence
region. When we increase the film thickness the two coexistence regions become
the prewetting lines of the semi-infinite system, while the triple temperature
converges towards the wetting transition temperature from above. The behavior
close to the tricritical point, which separates phase diagrams with one and two
critical points, is studied in the framework of a Ginzburg-Landau ansatz.
Two-dimensional profiles of the interface between the laterally coexisting
phases are calculated, and the interfacial and line tensions analyzed. The
effect of fluctuations and corrections to the self-consistent field theory are
discussed.Comment: Phys.Rev.E in prin
Utilization of ancillary studies in the cytologic diagnosis of respiratory lesions: The papanicolaou society of cytopathology consensus recommendations for respiratory cytology
Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/134863/1/dc23549.pdfhttp://deepblue.lib.umich.edu/bitstream/2027.42/134863/2/dc23549_am.pd
Ultra-Fast and Optimized Method for the Preparation of Rodent Testicular Cells for Flow Cytometric Analysis
Homogeneity of cell populations is a prerequisite for the analysis of biochemical and molecular events during male gamete differentiation. Given the complex organization of the mammalian testicular tissue, various methods have been used to obtain enriched or purified cell populations, including flow cell sorting. Current protocols are usually time-consuming and may imply loss of short-lived RNAs, which is undesirable for expression profiling. We describe an optimized method to speed up the preparation of suitable testicular cell suspensions for cytometric analysis of different spermatogenic stages from rodents. The procedure takes only 15 min including testis dissection, tissue cutting, and processing through the Medimachine System (Becton Dickinson). This method could be a substitute for the more tedious and time-consuming cell preparation techniques currently in use
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